Commits · main · github_fork / STARsolo.script · GitLab

Dec 15, 2023
- update · b09139c1
  Chaos authored Dec 15, 2023
  
  b09139c1
- update · 30f79b50
  Chaos authored Dec 15, 2023
  
  30f79b50
Nov 06, 2023
- update · 2d12ddc8
  Chaos authored Nov 06, 2023
  
  2d12ddc8
- update · 43de3891
  Chaos authored Nov 06, 2023
  
  43de3891
- update · 89607a82
  Chaos authored Nov 06, 2023
  
  89607a82
- update · 72d3934e
  Chaos authored Nov 06, 2023
  
  72d3934e
- update · f2ed701d
  Chaos authored Nov 06, 2023
  
  f2ed701d
- update · 9540895b
  Chaos authored Nov 06, 2023
  
  9540895b
Nov 03, 2023
- update · ebe5f84f
  Chaos authored Nov 03, 2023
  
  ebe5f84f
Oct 03, 2023
- modified starsolo_10x_auto.sh in scripts · 2626e524
  Chaos authored Oct 03, 2023
  
  2626e524
- modified starsolo_10x_auto.sh in scripts · 415b6fe3
  Chaos authored Oct 03, 2023
  
  415b6fe3
Sep 20, 2023
- modified starsolo_10x_auto.sh in scripts · 348612be
  Chaos authored Sep 20, 2023
  
  348612be
- modified starsolo_10x_auto.sh in scripts · 8f5e44df
  Chaos authored Sep 20, 2023
  
  8f5e44df
- update · 846e509a
  Chaos authored Sep 20, 2023
  
  846e509a
- update · 5a96cd74
  Chaos authored Sep 20, 2023
  
  5a96cd74
Sep 18, 2023
- update · c93e41d3
  Chaos authored Sep 18, 2023
  
  c93e41d3
- update · 878abc15
  Chaos authored Sep 18, 2023
  
  878abc15
Jun 28, 2023
- Updated README, removed cell filtering for plate-based methods · 958092b0
  Alexander Predeus authored Jun 28, 2023
  
  958092b0
May 23, 2023
- Fix the bug for gzipped Smart-seq input · cc5707ef
  Alexander Predeus authored May 23, 2023
  
  cc5707ef
Mar 24, 2023
- Typo fix · 76628b34
  Alexander Predeus authored Mar 24, 2023
  
  76628b34
- UMILEN bug fix, BAM sorting updates, syntax updates · 30a86909
  Alexander Predeus authored Mar 24, 2023
  
  30a86909
Feb 13, 2023
- Remove the bulk RNA-seq processing section, update the README · 4a990451
  Alexander Predeus authored Feb 13, 2023
  
  4a990451
Feb 07, 2023
- Update Dockerfile · 30afd0dc
  Simon Murray authored Feb 06, 2023
  
  30afd0dc
Nov 22, 2022
- updated bbmap adapters path to cellgeni · a05879e1
  Simon authored Nov 22, 2022
  
  a05879e1
Nov 18, 2022
- updated starsolo revision which fixes malloc error · 6ac32b2b
  Simon authored Nov 18, 2022
  
  6ac32b2b
Nov 17, 2022
- updated script paths for lustre migration · 0fac6365
  Simon authored Nov 17, 2022
  
  0fac6365
Oct 02, 2022
- Fixed starsolo_10x_auto.sh to use GeneFull for strand estimation · d856b486
  Alexander Predeus authored Oct 01, 2022
  
  d856b486
Aug 20, 2022
- solo_QC.sh now reports 10x whitelist version! · 496171ab
  Alexander Predeus authored Aug 19, 2022
  
  496171ab
- Update solo_QC.sh - include species · 0a1263b1
  Alexander Predeus authored Aug 19, 2022
  
  0a1263b1
- Modified solo_QC.sh - now includes single-end/paired-end info · bc67b5d3
  Alexander Predeus authored Aug 19, 2022
  
  bc67b5d3
Aug 16, 2022
- added samtools to path · 024fe419
  Simon Murray authored Aug 16, 2022
  
  024fe419
Aug 11, 2022
- added Dockerfile · 7b8968cd
  Simon authored Aug 11, 2022
  
  7b8968cd
Aug 10, 2022
- More updates and fixes - STAR v2.7.10a overhaul · 4b445398
  Alexander Predeus authored Aug 09, 2022
  
  v3.0
  
  4b445398
Aug 09, 2022
- Update to syntax & using STAR v2.7.10a · 31ceff51
  Alexander Predeus authored Aug 09, 2022
  
  31ceff51
May 16, 2022
- Update to fit STAR 2.7.10a · 8f5bda90
  Alexander Predeus authored May 16, 2022
  
  8f5bda90
Feb 20, 2022
- New 10x processing scripts · 605ae41c
  Alexander Predeus authored Feb 19, 2022
  
  v2.0
  
  605ae41c
Jan 18, 2022
- QC script update · dfe40fa9
  Alexander Predeus authored Jan 17, 2022
  
  v1.0
  
  dfe40fa9
Jan 17, 2022
- Solo QC script update · 11abf082
  Alexander Predeus authored Jan 17, 2022
  
  11abf082
Jan 15, 2022
- Syntax update · c3979aae
  Alexander Predeus authored Jan 14, 2022
  
  c3979aae
Nov 17, 2021
- README update · 70a0bb63
  Alexander Predeus authored Nov 17, 2021
  
  70a0bb63

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