https://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commits/main2023-12-15T18:42:24+08:00https://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/b09139c1f98ea7564ed61ef0fde05d5ee3dd9733update2023-12-15T18:42:24+08:00fc-ibb10511653013@mail.sustech.edu.cnhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/30f79b50f3fb8aa86c5d2b2d354fd2995b698172update2023-12-15T18:06:44+08:00fc-ibb10511653013@mail.sustech.edu.cnhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/2d12ddc803993a7a1847e063b7f97ed35501c17cupdate2023-11-06T18:17:58+08:00fc-ibb10511653013@mail.sustech.edu.cnhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/43de38912f20975183bd492019723b03be5babe1update2023-11-06T18:17:37+08:00fc-ibb10511653013@mail.sustech.edu.cnhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/89607a8279875a5b6bff38cb4018b9c9bcf257d5update2023-11-06T15:12:11+08:00fc-ibb10511653013@mail.sustech.edu.cnhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/72d3934e34273a9840418120708b811cddf92a00update2023-11-06T14:52:20+08:00fc-ibb10511653013@mail.sustech.edu.cnhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/f2ed701df7fc8d623e9f2ed9670a223a3c815f56update2023-11-06T13:42:41+08:00fc-ibb10511653013@mail.sustech.edu.cnhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/9540895bea34f511c1b00c4a332d1ff029a44930update2023-11-06T13:22:26+08:00fc-ibb10511653013@mail.sustech.edu.cnhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/ebe5f84f85dbff2f413f4e00e5e5d150ddeea8aaupdate2023-11-03T12:28:49+08:00fc-ibb10511653013@mail.sustech.edu.cnhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/2626e52496886bddfc38a803d387661c41c28c40modified starsolo_10x_auto.sh in scripts2023-10-03T11:01:17+08:00fc-ibb10511653013@mail.sustech.edu.cnhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/415b6fe3480e589850287feb9aa4afbd99a97f60modified starsolo_10x_auto.sh in scripts2023-10-03T11:01:02+08:00fc-ibb10511653013@mail.sustech.edu.cnhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/348612becb35e5f84de24608691eba7c84340d74modified starsolo_10x_auto.sh in scripts2023-09-20T14:24:40+08:00fc-ibb10511653013@mail.sustech.edu.cnhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/8f5e44df607e378352f498d993df30ee14a9c8edmodified starsolo_10x_auto.sh in scripts2023-09-20T10:51:18+08:00fc-ibb10511653013@mail.sustech.edu.cnhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/846e509a758f4ce6532b635d302c478ad934babcupdate2023-09-20T10:49:55+08:00fc-ibb10511653013@mail.sustech.edu.cnhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/5a96cd747fea2b4834b8ecc71175656b25f3ad3cupdate2023-09-20T09:45:54+08:00fc-ibb10511653013@mail.sustech.edu.cnhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/c93e41d3cc9eca6a929c7ac513df636656ba0240update2023-09-18T11:48:48+08:00fc-ibb10511653013@mail.sustech.edu.cnhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/878abc15b65a8361ae7b23d347c3a8da984cc52cupdate2023-09-18T11:35:44+08:00fc-ibb10511653013@mail.sustech.edu.cnhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/958092b0d488b232c774a790e8b2cda9d65a6a8bUpdated README, removed cell filtering for plate-based methods2023-06-28T11:58:31+01:00Alexander Predeuspredeus@gmail.comhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/cc5707ef45e64889026bb7d513f2ef1d9bc50440Fix the bug for gzipped Smart-seq input2023-05-23T08:03:32+01:00Alexander Predeusap41@sanger.ac.ukhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/76628b3455ba171228ff079b35b821ce62686927Typo fix2023-03-24T11:06:19+00:00Alexander Predeusap41@sanger.ac.ukhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/30a869091fb6e7e713e5cb88f433ef4e601b9f46UMILEN bug fix, BAM sorting updates, syntax updates2023-03-24T10:43:45+00:00Alexander Predeusap41@sanger.ac.ukhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/4a9904514c5a8230b92112579a53267633758705Remove the bulk RNA-seq processing section, update the README2023-02-13T12:41:20+00:00Alexander Predeusap41@sanger.ac.ukhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/30afd0dcf874a16ddcdaa0c03495c02042a53087Update Dockerfile2023-02-06T17:56:06+00:00Simon Murraysimondonaldmurray@gmail.comhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/a05879e1013b36db718e9be2964ced6992edf474updated bbmap adapters path to cellgeni2022-11-22T13:34:12+00:00Simonsimondonaldmurray@gmail.comhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/6ac32b2bd01e40f3bd17f47677c1856ffff01787updated starsolo revision which fixes malloc error2022-11-18T13:18:22+00:00Simonsimondonaldmurray@gmail.comhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/0fac63655d6535165277cd3e83f56c9f6a840aeeupdated script paths for lustre migration2022-11-17T11:01:36+00:00Simonsimondonaldmurray@gmail.comhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/d856b486ef09dfd9ab5b5454afe6d20fc2a75e56Fixed starsolo_10x_auto.sh to use GeneFull for strand estimation2022-10-01T21:45:25+01:00Alexander Predeusap41@sanger.ac.ukhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/496171ab26171632b257c06c02996259bd10a2d1solo_QC.sh now reports 10x whitelist version!2022-08-19T23:23:49+01:00Alexander Predeusap41@sanger.ac.ukhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/0a1263b1a0d567dd760d35fbe8f567d52fcc8feeUpdate solo_QC.sh - include species2022-08-19T22:52:34+01:00Alexander Predeusap41@sanger.ac.ukhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/bc67b5d340988eb8583e36477b8f6cfedbb77267Modified solo_QC.sh - now includes single-end/paired-end info2022-08-19T17:31:07+01:00Alexander Predeusap41@sanger.ac.ukhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/024fe419f065c83f9f031e8f65488584c8e2950aadded samtools to path2022-08-16T14:52:56+01:00Simon Murraysimondonaldmurray@gmail.comhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/7b8968cd8f48ee9b0cbd9b89984e3038abca6661added Dockerfile2022-08-11T09:52:38+01:00Simonsimondonaldmurray@gmail.comhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/4b445398661aa58687ade355c305e4147cd2a305More updates and fixes - STAR v2.7.10a overhaul2022-08-09T17:32:04+01:00Alexander Predeusap41@sanger.ac.ukhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/31ceff51e392c76ad9bd4897dbfd59028a36249eUpdate to syntax & using STAR v2.7.10a2022-08-09T13:36:33+01:00Alexander Predeusap41@sanger.ac.ukhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/8f5bda90d1d16e77a0accb2c39e97d0b999aff92Update to fit STAR 2.7.10a2022-05-16T10:49:00+01:00Alexander Predeusap41@sanger.ac.ukhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/605ae41c12968c4d8ccaf7da79f82e6c9947ad7cNew 10x processing scripts2022-02-19T18:28:32+00:00Alexander Predeusap41@sanger.ac.ukhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/dfe40fa941fa4a2f8f14d9ebf576baae2944dc0fQC script update2022-01-17T18:28:13+00:00Alexander Predeusap41@sanger.ac.ukhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/11abf08298af42a17d4b9dd482f03f4b22ee7a32Solo QC script update2022-01-17T13:24:35+00:00Alexander Predeusap41@sanger.ac.ukhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/c3979aae648df0922b535f9bb553b70128190787Syntax update2022-01-14T23:15:44+00:00Alexander Predeusap41@sanger.ac.ukhttps://mirrors.sustech.edu.cn/git/github_fork/STARsolo.script/-/commit/70a0bb6398a1601ebfa231906780a1b9a38ee586README update2021-11-17T10:37:18+00:00Alexander Predeusap41@sanger.ac.uk